STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_04022Ubiquitin carboxyl terminal hydrolase BAP1. (1327 aa)    
Predicted Functional Partners:
FGIG_02449
Adhesion regulating molecule 1.
   
 0.980
FGIG_01358
26S proteasome non-ATPase regulatory subunit 4.
    
 0.980
FGIG_09315
Uncharacterized protein.
    
 0.978
FGIG_03099
26S proteasome non-ATPase regulatory subunit.
   
 0.974
FGIG_03983
26S proteasome non-ATPase regulatory subunit.
   
 0.967
FGIG_00637
26S proteasome non ATPase regulatory subunit.
   
 0.967
FGIG_12102
26S proteasome non-ATPase regulatory subunit.
   
 0.965
FGIG_04527
Proteasome 26S subunit subunit 4 ATPase; Belongs to the AAA ATPase family.
   
 0.965
FGIG_06753
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
   
 0.965
FGIG_09948
26S proteasome non-ATPase regulatory subunit.
   
 0.963
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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