STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00624E3 ubiquitin-protein ligase NEURL3. (504 aa)    
Predicted Functional Partners:
FGIG_00932
Ankyrin repeat and SOCS box protein 13.
    
 0.697
FGIG_02598
Neural cell expressed developmentally down-regulated 8.
    
  0.682
FGIG_04261
RNA polymerase II transcription elongation factor; Belongs to the SKP1 family.
     
 0.667
FGIG_04617
Cullin-5; Belongs to the cullin family.
     
 0.662
FGIG_01898
E3 ubiquitin-protein ligase mib1.
   
 0.652
FGIG_06007
Putative rna polymerase ii transcription elongation factor elongin/siii subunit elongin b.
     
 0.652
FGIG_01896
E3 ubiquitin-protein ligase MIB2.
   
 0.652
FGIG_08617
FYVE-type domain-containing protein.
    
 0.596
FGIG_11904
Cullin-associated NEDD8-dissociated protein 1.
     
 0.583
FGIG_04346
Cullin-associated and neddylation-dissociated protein 1.
     
 0.583
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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