STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_11626MutS protein 5. (262 aa)    
Predicted Functional Partners:
FGIG_01079
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
 0.985
FGIG_09358
Mismatch repair endonuclease PMS2.
 
 0.945
FGIG_09458
DNA_mis_repair domain-containing protein.
  
 0.928
FGIG_12513
DNA mismatch repair protein MLH3.
  
 0.928
FGIG_07919
MUTSd domain-containing protein.
 
      0.899
FGIG_02292
Fanconi anemia group M protein.
    
 
 0.895
FGIG_02261
DDE_Tnp_IS1595 domain-containing protein.
  
 0.887
FGIG_11300
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.887
FGIG_01907
Uncharacterized protein.
   
 0.836
FGIG_01727
Uncharacterized protein.
   
 0.759
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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