STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_12296U3 small nucleolar ribonucleoprotein. (88 aa)    
Predicted Functional Partners:
FGIG_04595
Uncharacterized protein.
   
 0.992
FGIG_08407
WD_REPEATS_REGION domain-containing protein.
   
 0.992
FGIG_10739
Ribosome biogenesis protein BMS1.
   
 
 0.991
FGIG_08580
Sas10 domain-containing protein.
   
 
 0.991
FGIG_08606
U3 small nucleolar ribonucleoprotein IMP4.
   
 0.990
FGIG_11664
Nucleolar protein 6.
   
 0.989
FGIG_10603
U3 small nucleolar RNA-associated protein 14.
   
 
 0.988
FGIG_04422
Uncharacterized protein.
   
 0.987
FGIG_01904
Nucleolar protein 14.
   
 
 0.985
FGIG_00743
Deoxynucleotidyltransferase terminal interacting.
   
 
 0.985
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.