STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_09578Synovial apoptosis inhibitor 1 synoviolin. (442 aa)    
Predicted Functional Partners:
FGIG_01314
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.946
FGIG_11990
Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
    
 0.934
FGIG_09579
Putative e3 ubiquitin ligase ixodes scapularis e3 ubiquitin ligase.
 
      0.900
FGIG_11149
Ubiquitin protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.861
FGIG_10942
Protein sel-1 1.
   
 0.839
FGIG_06817
Putative extracellular protein sel-1.
   
 0.839
FGIG_03722
PRKCSH domain-containing protein.
   
 0.837
FGIG_04570
Derlin.
    
 0.837
FGIG_04569
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.837
FGIG_03539
PRKCSH domain-containing protein.
   
 0.837
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.