STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_04474Putative hepatoma derived growth factor. (374 aa)    
Predicted Functional Partners:
FGIG_04722
Cyclin-dependent kinase 12.
    
 
 0.926
FGIG_00937
Cyclin-T2; Belongs to the cyclin family.
   
 
 0.671
FGIG_04340
Cyclin-K; Belongs to the cyclin family.
   
 
 0.671
FGIG_08260
Putative cyclin.
   
 
 0.671
FGIG_10000
G2/M phase-specific E3 ubiquitin-protein ligase.
    
 
 0.536
FGIG_02861
Uncharacterized protein.
    
 
 0.536
FGIG_06189
Myeloid/lymphoid or mixed-lineage leukemia.
    
 
 0.536
FGIG_11000
Histone-lysine N-methyltransferase MLL4.
    
 
 0.536
FGIG_02242
Transcription factor 20.
    
 
 0.536
FGIG_02873
Histone H2A; Belongs to the histone H2A family.
    
   0.526
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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