FGIG_12006 protein (Fasciola gigantica) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

FGIG_12006

Uncharacterized protein. (341 aa)

Predicted Functional Partners:

FGIG_04542

0.999

FGIG_02570

0.999

FGIG_04595

0.999

FGIG_03104

0.999

FGIG_11664

0.999

FGIG_01553

0.999

FGIG_03389

0.999

FGIG_04951

0.999

FGIG_08407

0.999

FGIG_08777

0.999

Your Current Organism:

Fasciola gigantica

NCBI taxonomy Id: 46835
Other names: F. gigantica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FGIG_01553	FGIG_02570	A0A504YTQ3	A0A504YL51	WD repeat containing protein 36.	U3 small nucleolar rna associated protein 6.	0.999
FGIG_01553	FGIG_03104	A0A504YTQ3	A0A504YR37	WD repeat containing protein 36.	U3 small nucleolar RNA-associated protein 15.	0.999
FGIG_01553	FGIG_03389	A0A504YTQ3	A0A504YZF3	WD repeat containing protein 36.	HEAT repeat-containing protein 1.	0.999
FGIG_01553	FGIG_04542	A0A504YTQ3	A0A504Y7R0	WD repeat containing protein 36.	Putative WD repeat-containing protein.	0.999
FGIG_01553	FGIG_04595	A0A504YTQ3	A0A504YQR4	WD repeat containing protein 36.	Uncharacterized protein.	0.999
FGIG_01553	FGIG_04951	A0A504YTQ3	A0A504Z0P8	WD repeat containing protein 36.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.999
FGIG_01553	FGIG_08407	A0A504YTQ3	A0A504Z138	WD repeat containing protein 36.	WD_REPEATS_REGION domain-containing protein.	0.999
FGIG_01553	FGIG_08777	A0A504YTQ3	A0A504Z718	WD repeat containing protein 36.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.999
FGIG_01553	FGIG_11664	A0A504YTQ3	A0A504YS04	WD repeat containing protein 36.	Nucleolar protein 6.	0.999
FGIG_01553	FGIG_12006	A0A504YTQ3	A0A504YVY5	WD repeat containing protein 36.	Uncharacterized protein.	0.999
FGIG_02570	FGIG_01553	A0A504YL51	A0A504YTQ3	U3 small nucleolar rna associated protein 6.	WD repeat containing protein 36.	0.999
FGIG_02570	FGIG_03104	A0A504YL51	A0A504YR37	U3 small nucleolar rna associated protein 6.	U3 small nucleolar RNA-associated protein 15.	0.997
FGIG_02570	FGIG_03389	A0A504YL51	A0A504YZF3	U3 small nucleolar rna associated protein 6.	HEAT repeat-containing protein 1.	0.996
FGIG_02570	FGIG_04542	A0A504YL51	A0A504Y7R0	U3 small nucleolar rna associated protein 6.	Putative WD repeat-containing protein.	0.999
FGIG_02570	FGIG_04595	A0A504YL51	A0A504YQR4	U3 small nucleolar rna associated protein 6.	Uncharacterized protein.	0.999
FGIG_02570	FGIG_04951	A0A504YL51	A0A504Z0P8	U3 small nucleolar rna associated protein 6.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.999
FGIG_02570	FGIG_08407	A0A504YL51	A0A504Z138	U3 small nucleolar rna associated protein 6.	WD_REPEATS_REGION domain-containing protein.	0.999
FGIG_02570	FGIG_08777	A0A504YL51	A0A504Z718	U3 small nucleolar rna associated protein 6.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.991
FGIG_02570	FGIG_11664	A0A504YL51	A0A504YS04	U3 small nucleolar rna associated protein 6.	Nucleolar protein 6.	0.999
FGIG_02570	FGIG_12006	A0A504YL51	A0A504YVY5	U3 small nucleolar rna associated protein 6.	Uncharacterized protein.	0.999