STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_08727Topoisomerase II-associated PAT1 domain-containing protein. (2705 aa)    
Predicted Functional Partners:
FGIG_09164
Rap guanine nucleotide exchange factor 4.
    
 0.927
FGIG_05014
Adenylate kinase 9.
    
 0.893
FGIG_07577
Uncharacterized protein.
   
 0.887
FGIG_02172
HMG-CoA synthase.
   
0.839
FGIG_09782
RAB3C member RAS oncogene family.
   
 
 0.817
FGIG_03141
E3 SUMO-protein ligase RanBP2.
    
 0.791
FGIG_08549
Uncharacterized protein.
    
 0.760
FGIG_06327
Retinoblastoma-binding protein 5.
    
 0.738
FGIG_03131
WD_REPEATS_REGION domain-containing protein.
    
 0.718
FGIG_03132
Telomerase protein component 1.
    
 0.718
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.