STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_08420Sorting nexin-7. (544 aa)    
Predicted Functional Partners:
FGIG_08576
PX domain-containing protein.
    
 0.990
FGIG_00327
Cyclin-G-associated kinase.
    
 0.972
FGIG_00328
Cyclin G-associated kinase.
    
 0.972
FGIG_02091
Putative membrane coat complex retromer subunit vps26.
    
 
 0.948
FGIG_08624
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.948
FGIG_10369
Vacuolar protein sorting-associated protein 29.
   
 
 0.936
FGIG_07035
Vesicle-associated membrane protein 2.
    
 0.826
FGIG_08863
Vesicle-associated membrane protein 1.
    
 0.826
FGIG_06731
Vacuolar protein sorting-associated protein 35.
   
 
 0.769
FGIG_11853
Putative vacuolar sorting protein.
   
 
 0.769
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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