STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_10168Ribosomal L1 domain-containing protein 1. (321 aa)    
Predicted Functional Partners:
FGIG_00641
RNA helicase.
   
 
 0.999
FGIG_11233
Guanine nucleotide-binding protein 3 protein.
   
 
 0.999
FGIG_08555
RRM domain-containing protein.
   
 
 0.999
FGIG_12205
Ribosomal biogenesis protein.
   
 
 0.998
FGIG_06288
rRNA-processing protein EBP2.
   
 
 0.998
FGIG_07163
Ribosomal RNA processing protein 1.
   
 
 0.998
FGIG_10690
Uncharacterized protein.
   
 
 0.997
FGIG_10642
Ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.997
FGIG_01389
Putative ribosome bioproteinsis protein.
   
 
 0.997
FGIG_12377
Peter pan.
   
   0.997
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.