STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_04380CH_2 domain-containing protein. (1798 aa)    
Predicted Functional Partners:
FGIG_05014
Adenylate kinase 9.
    
 0.862
FGIG_08413
Guanylate kinase-like domain-containing protein.
   
 0.844
FGIG_02585
Uncharacterized protein.
    
 0.825
FGIG_05536
Sperm-associated antigen 6.
   
 
 0.738
FGIG_04368
Coiled-coil domain-containing protein 40.
    
 0.688
FGIG_00852
Uncharacterized protein.
   
 0.659
FGIG_05845
Leucine-rich repeat-containing protein 40.
    
 
 0.656
FGIG_09615
Cytochrome b5 reductase 4.
    
 0.633
FGIG_01485
Sperm flagellar protein 1.
    
 
 0.625
FGIG_09315
Uncharacterized protein.
    
 0.616
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.