STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_06359Acid sphingomyelinase phosphodiesterase 3b. (942 aa)    
Predicted Functional Partners:
FGIG_06991
Putative neutral sphingomyelinase.
     
 0.823
FGIG_06992
Neutral ceramidase.
     
 0.802
FGIG_04591
Sphingomyelin synthetase.
     
 0.802
FGIG_05614
Sphingomyelin phosphodiesterase 4.
     
 0.753
FGIG_08383
Putative RNA polymerase II ctd phosphatase.
     
 0.724
FGIG_00791
Bile acid beta glucosidase.
     
 0.724
FGIG_01455
Ceramide kinase.
    
 0.718
FGIG_01456
Uncharacterized protein.
    
 0.718
FGIG_02430
DAGKc domain-containing protein.
    
 0.671
FGIG_09678
Uncharacterized protein.
     
 0.669
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.