STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_03269Transcription factor IIB. (201 aa)    
Predicted Functional Partners:
FGIG_00518
Uncharacterized protein.
    
 
 0.673
FGIG_07288
Parkin coregulated protein.
    
 
 0.658
FGIG_12378
Enkurin.
    
 
 0.655
FGIG_08463
ARL2_Bind_BART domain-containing protein.
    
 
 0.652
FGIG_00150
Cilia-and flagella-associated protein 45.
    
 
 0.630
FGIG_03861
Parkin coregulated protein.
    
 
 0.630
FGIG_06019
WD repeat containing protein 16.
    
 
 0.619
FGIG_08399
Uncharacterized protein.
    
   0.618
FGIG_11747
Uncharacterized protein.
    
   0.618
FGIG_08301
Uncharacterized protein.
    
   0.618
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.