STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_04508Transcriptional enhancer factor TEF-1. (204 aa)    
Predicted Functional Partners:
FGIG_03292
WW domain-containing protein.
   
 0.984
FGIG_08415
E3 ubiquitin-protein ligase.
    
 0.780
FGIG_08417
E3 ubiquitin-protein ligase.
    
 0.780
FGIG_04583
Uncharacterized protein.
    
 0.780
FGIG_04455
E3 ubiquitin-protein ligase.
    
 0.780
FGIG_04758
Neural cell expressed developmentally down-regulated 4.
    
 0.780
FGIG_04757
E3 ubiquitin-protein ligase.
    
 0.780
FGIG_04098
Insulinoma-associated protein 2.
    
 
 0.656
FGIG_04099
Uncharacterized protein.
    
 
 0.656
FGIG_03759
Runt domain-containing protein.
     
 0.640
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.