STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_07252Rho GTPase activating protein 39. (603 aa)    
Predicted Functional Partners:
FGIG_02585
Uncharacterized protein.
    
 0.909
FGIG_00586
WD repeat-containing protein 18.
   
 0.739
FGIG_04352
28S ribosomal protein S11 mitochondrial.
   
  0.713
FGIG_09127
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.696
FGIG_00882
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.693
FGIG_09440
Lamin; Belongs to the intermediate filament family.
    
 0.690
FGIG_03874
LTD domain-containing protein.
    
 0.690
FGIG_10435
LTD domain-containing protein.
    
 0.688
FGIG_05203
Uncharacterized protein.
    
 0.687
FGIG_00789
Alpha actinin sarcomeric.
    
 0.662
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.