STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00623Ubiquitin activating enzyme. (434 aa)    
Predicted Functional Partners:
FGIG_02421
Uncharacterized protein.
  
 0.983
FGIG_08499
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
  
 
 
 0.977
FGIG_04100
Putative E3 ubiquitin-protein ligase TRIP12.
    
 0.976
FGIG_07076
UBA3.
     
 0.862
FGIG_02560
Uncharacterized protein.
  
 0.850
FGIG_11994
Small ubiquitin-related modifier.
   
 0.844
FGIG_08041
Ubiquitin-conjugating enzyme E2 F; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.842
FGIG_06587
Ubiquitin-conjugating enzyme E2 F; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.842
FGIG_11773
E3 UFM1-protein ligase 1.
   
 
 0.842
FGIG_11149
Ubiquitin protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.830
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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