STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_05518Cation efflux protein: zinc transporter. (485 aa)    
Predicted Functional Partners:
FGIG_07095
Copper-transporting ATPase 1.
  
  
 0.716
FGIG_08470
Zinc transporter.
  
 0.687
FGIG_10818
Zinc transporter.
   
 0.677
FGIG_09282
Zinc transporter ZIP13.
   
 0.675
FGIG_09768
Natural resistance-associated macrophage protein 2.
 
  
 0.626
FGIG_01393
Zinc transporter ZIP9-B.
   
 
 0.622
FGIG_10937
Zinc transporter ZIP3.
   
 
 0.612
FGIG_02739
Uncharacterized protein.
   
 
 0.612
FGIG_05678
Zinc transporter 5.
  
 
 
0.566
FGIG_10051
Zinc transporter ZIP8.
  
 0.555
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.