STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_07443Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (219 aa)    
Predicted Functional Partners:
FGIG_05418
Syntaxin 5.
    
 
 0.707
FGIG_02716
Syntaxin 5.
    
 
 0.707
FGIG_02100
Synaptobrevin like protein YKT6; Belongs to the synaptobrevin family.
    
 
 0.599
FGIG_06528
RAS small monomeric GTPase Rab6.
    
 
 0.539
FGIG_00750
tRNA (Guanine(46)-N(7))-methyltransferase.
    
 
 0.539
FGIG_07914
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.529
FGIG_12157
Golgi SNAP receptor complex member 1.
   
 
 0.514
FGIG_01885
Syntaxin-16 isoform c; Belongs to the syntaxin family.
    
   0.426
FGIG_03427
Vesicle transport through interaction with.
    
 
 0.425
FGIG_00991
CD97 antigen.
      
 0.424
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.