STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_10729Uncharacterized protein. (687 aa)    
Predicted Functional Partners:
FGIG_10528
39S ribosomal protein L30 mitochondrial.
      
 0.622
FGIG_06911
CLAP1.
      
 0.581
FGIG_09357
Hydroxymethylglutaryl-CoA lyase mitochondrial.
      
 0.571
FGIG_05448
Riboflavin transporter 2.
   
  
 0.494
FGIG_01079
DNA_MISMATCH_REPAIR_2 domain-containing protein.
      
 0.424
FGIG_06334
N-acetylated-alpha-linked acidic dipeptidase 2.
   
  
 0.420
FGIG_04934
Uncharacterized protein.
      
 0.416
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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