STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_03861Parkin coregulated protein. (241 aa)    
Predicted Functional Partners:
FGIG_11909
DUF667 domain-containing protein.
    
 
 0.981
FGIG_12378
Enkurin.
   
 
 0.921
FGIG_11888
Uncharacterized protein.
   
   0.731
FGIG_05395
Uncharacterized protein.
   
   0.731
FGIG_12548
Meiosis expressed protein 1.
    
 
 0.667
FGIG_10707
Meiosis expressed protein 1.
    
 
 0.667
FGIG_08924
EF-hand domain (C-terminal) containing 2.
   
 
 0.662
FGIG_04743
Claudin protein septate junction protein.
   
 
 0.662
FGIG_06452
EF-hand domain-containing protein 1.
   
 
 0.662
FGIG_06451
EF-hand domain-containing protein 1.
   
 
 0.662
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.