STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_09108NGFI-A-binding protein. (498 aa)    
Predicted Functional Partners:
FGIG_07421
Zinc finger protein rotund.
    
 0.859
FGIG_04749
Chromodomain-helicase-DNA-binding protein Mi-2.
    
 0.724
FGIG_06174
Chromodomain-helicase-DNA-binding protein 3.
    
 0.724
FGIG_11995
Coiled-coil domain-containing protein.
    
  0.564
FGIG_00180
Chromodomain-helicase-DNA-binding protein 7.
    
  0.564
FGIG_04635
INO80.
    
  0.564
FGIG_11419
Translin-associated factor X-interacting protein 1.
    
  0.564
FGIG_05655
Helicase ARIP4.
    
  0.564
FGIG_09951
Uncharacterized protein.
    
  0.564
FGIG_04580
DNA excision repair protein ERCC-6.
    
  0.564
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.