STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_05446Large subunit ribosomal protein L19. (329 aa)    
Predicted Functional Partners:
FGIG_03529
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
FGIG_00310
Uncharacterized protein.
  
 
 0.999
FGIG_02523
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
FGIG_01502
Putative 28S ribosomal protein S16 mitochondrial.
  
 
 0.999
FGIG_06928
Uncharacterized protein.
  
 
 0.999
FGIG_06754
U3 small nucleolar ribonucleoprotein IMP3.
   
 
 0.999
FGIG_07507
Ribosomal protein L35.
   
 
 0.999
FGIG_04352
28S ribosomal protein S11 mitochondrial.
  
 
 0.999
FGIG_01136
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 0.999
FGIG_03007
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.999
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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