STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_03215RCC1 domain-containing protein 1. (189 aa)    
Predicted Functional Partners:
FGIG_05103
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.824
FGIG_03141
E3 SUMO-protein ligase RanBP2.
   
 0.817
FGIG_01248
Serine/threonine-protein kinase Nek7.
    
 0.719
FGIG_07208
AN1-type zinc finger protein 4.
    
 0.697
FGIG_03129
Putative ubiquitin 1.
    
 0.697
FGIG_09457
RING-type domain-containing protein.
   
  0.659
FGIG_09315
Uncharacterized protein.
    
 0.656
FGIG_01512
Recombining binding protein suppressor of hairless.
   
 0.653
FGIG_01511
Recombining binding protein suppressor of hairless.
   
 0.653
FGIG_07566
Uncharacterized protein.
    
 0.635
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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