STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_03044Histone-binding protein RBBP4. (448 aa)    
Predicted Functional Partners:
FGIG_12516
Retrovirus Pol polyprotein from transposon.
    
 0.995
FGIG_00023
Retrovirus Pol polyprotein from transposon.
    
 0.995
FGIG_10179
VEFS-Box domain-containing protein.
    
 0.985
FGIG_03751
Histone acetyltransferase type B catalytic subunit.
   
 0.984
FGIG_11279
Polycomb protein EED.
   
 0.984
FGIG_01928
Enhancer of zeste.
    
 0.984
FGIG_00596
Mortality factor 4 protein 1.
   
 0.977
FGIG_04749
Chromodomain-helicase-DNA-binding protein Mi-2.
   
 0.972
FGIG_02731
SWI:SNF matrix associated.
   
 0.969
FGIG_07393
Zinc finger protein AEBP2.
   
 0.964
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.