STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_11753Sulfotransferase family protein. (252 aa)    
Predicted Functional Partners:
FGIG_02585
Uncharacterized protein.
     
 0.865
FGIG_10619
RNA polymerase-associated protein LEO1.
    
 0.859
FGIG_01984
Transcription elongation factor SPT5.
   
 0.800
FGIG_05261
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.794
FGIG_12293
DNA-directed RNA polymerase II subunit J.
    
 0.784
FGIG_01209
DNA-directed RNA polymerase II subunit C.
    
 0.784
FGIG_05794
Metallothionein-I transcription activator.
    
 0.784
FGIG_00017
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.784
FGIG_11269
Dna directed rna polymerases i ii and iii.
    
 0.784
FGIG_12452
Dna directed rna polymerases i ii and iii.
    
 0.784
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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