STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_02628Selenide water dikinase. (290 aa)    
Predicted Functional Partners:
FGIG_09961
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.971
FGIG_02962
Putative pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.953
FGIG_07075
Ubiquitin-activating enzyme E1 C.
 
  
 0.949
FGIG_02367
Selenocysteine lyase.
    
 0.910
FGIG_06862
Rho-associated protein kinase 2.
    
 0.812
FGIG_09932
Cysteine desulfurase NFS1.
    
 0.812
FGIG_01926
Transmembrane protein 41B variant.
  
 
  0.797
FGIG_06036
Dihydrolipoamide dehydrogenase.
  
 
 0.768
FGIG_08117
Heat shock protein 67B2.
    
 0.745
FGIG_04325
Heat shock protein 67B2.
    
 0.745
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.