STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00451DNA-directed RNA polymerase. (828 aa)    
Predicted Functional Partners:
FGIG_02944
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.992
FGIG_06479
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.988
FGIG_01329
Uncharacterized protein.
   
 0.986
FGIG_10655
Dorsal switch protein 1.
    
 0.799
FGIG_04682
Dorsal switch protein 1.
    
 0.799
FGIG_03811
High mobility group protein DSP1.
    
 0.799
FGIG_10852
Uncharacterized protein.
    
 0.799
FGIG_10579
High mobility group protein 20A.
    
 0.799
FGIG_03295
DNA-directed RNA polymerase subunit beta; Belongs to the RNA polymerase beta chain family.
   
  
 0.745
FGIG_12573
DNA-directed RNA polymerase subunit beta.
   
  
 0.745
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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