STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380485_02657Unannotated protein. (391 aa)    
Predicted Functional Partners:
GCA_000380485_00317
Unannotated protein.
 
 0.904
GCA_000380485_00293
Unannotated protein.
 0.903
GCA_000380485_00405
Unannotated protein.
 
 
 
 0.795
GCA_000380485_00964
Unannotated protein.
  
     0.758
GCA_000380485_02429
Unannotated protein.
  
 
 0.678
GCA_000380485_00294
Unannotated protein.
 
 
 
 0.623
GCA_000380485_00295
Unannotated protein.
 
 
 
 0.603
GCA_000380485_00337
Unannotated protein.
   
 
 0.601
GCA_000380485_01272
Unannotated protein.
   
 
 0.601
GCA_000380485_01863
Unannotated protein.
   
 
 0.601
Your Current Organism:
Gordonia kroppenstedtii
NCBI taxonomy Id: 468556
Other names: G. kroppenstedtii DSM 45133, Gordonia kroppenstedtii DSM 45133, Gordonia kroppenstedtii NP8-5, Gordonia sp. NP8-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.