STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380485_03012Unannotated protein. (429 aa)    
Predicted Functional Partners:
GCA_000380485_03011
Unannotated protein.
     
 0.635
GCA_000380485_02012
Unannotated protein.
  
 
   0.623
GCA_000380485_03010
Unannotated protein.
       0.603
GCA_000380485_03391
Unannotated protein.
  
 
   0.588
GCA_000380485_03390
Unannotated protein.
  
 
   0.587
GCA_000380485_03389
Unannotated protein.
  
 
   0.584
GCA_000380485_03795
Unannotated protein.
  
 
   0.565
GCA_000380485_00256
Unannotated protein.
  
 
   0.514
GCA_000380485_01828
Unannotated protein.
    
   0.493
GCA_000380485_01887
Unannotated protein.
    
   0.493
Your Current Organism:
Gordonia kroppenstedtii
NCBI taxonomy Id: 468556
Other names: G. kroppenstedtii DSM 45133, Gordonia kroppenstedtii DSM 45133, Gordonia kroppenstedtii NP8-5, Gordonia sp. NP8-5
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.