STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JP75_03950beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)    
Predicted Functional Partners:
JP75_15625
Glycoside hydrolase family 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.844
JP75_19820
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.815
JP75_23210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.815
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.731
JP75_10655
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.699
JP75_08645
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.660
JP75_01215
N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.653
JP75_04000
Microcystin degradation protein MlrC; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
     0.636
JP75_19110
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.626
JP75_25535
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.604
Your Current Organism:
Devosia riboflavina
NCBI taxonomy Id: 46914
Other names: ATCC 9526, CIP 59.10, D. riboflavina, DSM 7230, IFO 13584, JCM 21244, LMG 2277, LMG:2277, NBRC 13584, NRRL B-2463, NRRL B-784, Pseudomonas riboflavina, strain Foster strain 4R3337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.