Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
JP75_04445 | JP75_04450 | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.999 |
JP75_04445 | JP75_15505 | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
JP75_04450 | JP75_04445 | Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.999 |
JP75_04450 | JP75_15505 | Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
JP75_05225 | JP75_15505 | Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
JP75_14170 | JP75_15505 | Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
JP75_15505 | JP75_04445 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.777 |
JP75_15505 | JP75_04450 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.874 |
JP75_15505 | JP75_05225 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
JP75_15505 | JP75_14170 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
JP75_15505 | JP75_15510 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
JP75_15510 | JP75_15505 | Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |