STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_0084PFAM: cell divisionFtsK/SpoIIIE; KEGG: cvi:CV_2479 cell division FtsK transmembrane protein. (460 aa)    
Predicted Functional Partners:
Tbis_0080
Hypothetical protein.
 
  
 0.907
Tbis_0085
Hypothetical protein.
     
 0.866
Tbis_0692
Hypothetical protein; Belongs to the WXG100 family.
  
 
 0.860
Tbis_0078
PFAM: integrase family protein; KEGG: dac:Daci_1611 integrase family protein.
 
   
 0.802
Tbis_0432
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: cps:CPS_2928 hypothetical protein.
 
     0.753
Tbis_1909
PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: noc:Noc_2092 integrins alpha chain.
  
   0.720
Tbis_0083
KEGG: similar to C6orf97 protein.
       0.680
Tbis_0747
Hypothetical protein.
 
     0.667
Tbis_0810
Hypothetical protein.
  
     0.664
Tbis_0802
KEGG: bbr:BB2737 hypothetical protein.
  
     0.651
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.