STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_0304Histidine kinase; PFAM: Nitrate and nitrite sensing domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: scl:sce8108 sensor histidine kinase. (697 aa)    
Predicted Functional Partners:
Tbis_0303
PFAM: protein of unknown function DUF742.
 
     0.947
Tbis_0155
PFAM: Roadblock/LC7 family protein; KEGG: lch:Lcho_0658 roadblock/LC7 family protein.
     0.798
Tbis_3254
PFAM: Roadblock/LC7 family protein; KEGG: pna:Pnap_2813 roadblock/LC7 family protein.
     0.795
Tbis_0975
PFAM: Roadblock/LC7 family protein; KEGG: pna:Pnap_2813 roadblock/LC7 family protein.
     0.783
Tbis_0971
PFAM: Roadblock/LC7 family protein; KEGG: pna:Pnap_2813 roadblock/LC7 family protein.
     0.781
Tbis_0154
PFAM: protein of unknown function DUF742.
 
     0.780
Tbis_0976
PFAM: protein of unknown function DUF742.
 
     0.780
Tbis_3253
PFAM: protein of unknown function DUF742.
 
     0.780
Tbis_0972
PFAM: protein of unknown function DUF742.
 
     0.779
Tbis_2940
PFAM: protein of unknown function DUF742.
 
     0.778
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.