STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_0312KEGG: reu:Reut_A0491 hypothetical protein. (142 aa)    
Predicted Functional Partners:
Tbis_0311
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: transcriptional regulator protein.
       0.773
Tbis_0308
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_2642 binding-protein-dependent transport systems inner membrane component.
       0.458
Tbis_0309
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A0946 oligopeptide ABC transporter, permease protein.
       0.458
Tbis_0310
PFAM: extracellular solute-binding protein family 5; KEGG: glo:Glov_2097 4-phytase.
       0.458
Tbis_0306
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_1972 ABC transporter related.
       0.403
Tbis_0307
KEGG: azc:AZC_1983 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.403
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.