STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_0340PFAM: Tetratricopeptide TPR_4; KEGG: acr:Acry_1350 methyltransferase type 12. (418 aa)    
Predicted Functional Partners:
Tbis_2864
KEGG: scl:sce6644 hypothetical protein.
  
     0.682
Tbis_0341
PFAM: NUDIX hydrolase; KEGG: kpe:KPK_0067 putative ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
  
    0.639
Tbis_1241
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: pag:PLES_34081 putative regulatory protein.
  
    0.620
Tbis_3431
Hypothetical protein; KEGG: ccs:CCNA_03388 lantibiotic export permease protein.
  
    0.619
Tbis_0349
KEGG: pap:PSPA7_0575 hypothetical protein.
  
     0.587
Tbis_3280
PFAM: Abortive infection protein; KEGG: mmr:Mmar10_0004 abortive infection protein.
  
     0.578
Tbis_1756
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: rle:RL2180 putative helix-turn-helix transcriptional regulatory protein.
  
     0.560
Tbis_1653
Hypothetical protein.
  
     0.557
Tbis_1599
PFAM: extracellular solute-binding protein family 5; KEGG: peptide ABC transporter.
  
     0.537
Tbis_2714
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3690 sugar transport system (sugar- binding protein).
  
     0.532
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.