STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_0694Hypothetical protein; KEGG: acp:A2cp1_3600 serine/threonine protein kinase with WD40 repeats. (564 aa)    
Predicted Functional Partners:
Tbis_0873
PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A2068 hypothetical protein.
  
     0.761
Tbis_1242
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Tetratricopeptide TPR_4; SMART: helix-turn-helix domain protein; KEGG: bca:BCE_1807 DNA-binding protein.
  
     0.704
Tbis_2194
PFAM: Carboxymuconolactone decarboxylase; KEGG: pst:PSPTO_2865 4-carboxymuconolactone decarboxylase, putative.
  
     0.665
Tbis_3136
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: bba:Bd3625 3-demethylubiquinone-9 3- methyltransferase.
  
     0.660
Tbis_0080
Hypothetical protein.
  
     0.649
Tbis_0033
KEGG: afw:Anae109_0338 hypothetical protein.
  
     0.625
Tbis_2547
Hypothetical protein.
  
     0.621
Tbis_2899
Hypothetical protein.
  
     0.610
Tbis_0810
Hypothetical protein.
  
     0.604
Tbis_0084
PFAM: cell divisionFtsK/SpoIIIE; KEGG: cvi:CV_2479 cell division FtsK transmembrane protein.
  
     0.598
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.