STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_0750KEGG: hypothetical protein LOC739882. (595 aa)    
Predicted Functional Partners:
Tbis_1491
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.865
Tbis_2965
PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein; KEGG: gsu:GSU3411 ATP-dependent DNA helicase PcrA, putative.
  
 
 0.771
Tbis_0463
KEGG: SL44-1; basic proline-rich protein.
  
     0.726
Tbis_0762
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: mrd:Mrad2831_3585 MerR family transcriptional regulator.
 
     0.662
Tbis_3136
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: bba:Bd3625 3-demethylubiquinone-9 3- methyltransferase.
  
 
   0.631
Tbis_0462
KEGG: bbr:BB1601 hypothetical protein.
  
     0.609
Tbis_3002
Hypothetical protein; KEGG: COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI, alpha.
  
 
   0.609
Tbis_1794
Hypothetical protein; KEGG: similar to hCG2029577.
  
 
 0.600
Tbis_1415
KEGG: Hypothetical protein CBG02561.
  
     0.595
Tbis_3052
KEGG: similar to hedgehog protein.
 
     0.586
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.