Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Tbis_1007PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: swi:Swit_3332 AsnC family transcriptional regulator. (161 aa)    
Predicted Functional Partners:
Tbis_1013
PFAM: FAD dependent oxidoreductase; KEGG: cps:CPS_0095 hypothetical protein.
 
  
 0.815
Tbis_0821
PFAM: aminotransferase class-III; KEGG: bmj:BMULJ_05512 putative adenosylmethionine-8- amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.774
Tbis_1987
PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll2947 hypothetical protein.
 
    0.700
Tbis_3107
PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: saz:Sama_0605 DNA-binding transcriptional regulator AsnC.
  
     0.616
Tbis_1010
PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_02206 spermidine/putrescine-binding periplasmic protein.
 
     0.602
Tbis_1011
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_5175 polyamine ABC transporter, permease protein.
 
     0.520
Tbis_1008
PFAM: Aldehyde Dehydrogenase; KEGG: abb:ABBFA_002457 gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.491
Tbis_1012
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A1339 spermidine/putrescine ABC transporter, permease protein.
 
     0.480
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
       0.431
Tbis_0144
PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bcj:BCAM1597 AsnC family regulatory protein.
  
     0.402
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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