STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1104PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3068 ABC transporter, permease protein, MalFG family. (334 aa)    
Predicted Functional Partners:
Tbis_1103
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00204 ABC-type sugar transport system, permease component.
 0.994
Tbis_1105
PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b20634 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
 
 0.994
Tbis_2198
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PE00356 sugar ABC transporter, ATP- binding protein; Belongs to the ABC transporter superfamily.
 
 0.981
Tbis_1887
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rlt:Rleg2_5747 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.979
Tbis_1886
PFAM: extracellular solute-binding protein family 1; KEGG: scl:sce0764 putative sugar binding ABC transporter protein.
 
 0.898
Tbis_1884
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_5379 putative sugar ABC transporter, permease protein.
 
 0.892
Tbis_1089
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_3555 binding-protein-dependent transport systems inner membrane component.
   0.889
Tbis_2716
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sml:Smlt3250 putative sugar transporter, permease protein.
   0.885
Tbis_1893
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 sugar transport system (permease).
   0.869
Tbis_3249
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02026 multiple sugar transport system permease protein.
   0.869
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.