Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tbis_1156 | Tbis_1158 | Tbis_1156 | Tbis_1158 | PFAM: PhoH family protein; SMART: KH domain protein; KEGG: mxa:MXAN_4738 PhoH family protein. | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | 0.779 |
Tbis_1156 | Tbis_1159 | Tbis_1156 | Tbis_1159 | PFAM: PhoH family protein; SMART: KH domain protein; KEGG: mxa:MXAN_4738 PhoH family protein. | Hypothetical protein. | 0.448 |
Tbis_1156 | Tbis_1161 | Tbis_1156 | Tbis_1161 | PFAM: PhoH family protein; SMART: KH domain protein; KEGG: mxa:MXAN_4738 PhoH family protein. | KEGG: ank:AnaeK_0654 cytidine deaminase. | 0.686 |
Tbis_1156 | era | Tbis_1156 | Tbis_1162 | PFAM: PhoH family protein; SMART: KH domain protein; KEGG: mxa:MXAN_4738 PhoH family protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.765 |
Tbis_1156 | ybeY | Tbis_1156 | Tbis_1157 | PFAM: PhoH family protein; SMART: KH domain protein; KEGG: mxa:MXAN_4738 PhoH family protein. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.988 |
Tbis_1158 | Tbis_1156 | Tbis_1158 | Tbis_1156 | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | PFAM: PhoH family protein; SMART: KH domain protein; KEGG: mxa:MXAN_4738 PhoH family protein. | 0.779 |
Tbis_1158 | Tbis_1159 | Tbis_1158 | Tbis_1159 | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | Hypothetical protein. | 0.524 |
Tbis_1158 | Tbis_1160 | Tbis_1158 | Tbis_1160 | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | Hypothetical protein. | 0.411 |
Tbis_1158 | Tbis_1161 | Tbis_1158 | Tbis_1161 | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | KEGG: ank:AnaeK_0654 cytidine deaminase. | 0.808 |
Tbis_1158 | era | Tbis_1158 | Tbis_1162 | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.585 |
Tbis_1158 | ybeY | Tbis_1158 | Tbis_1157 | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.902 |
Tbis_1159 | Tbis_1156 | Tbis_1159 | Tbis_1156 | Hypothetical protein. | PFAM: PhoH family protein; SMART: KH domain protein; KEGG: mxa:MXAN_4738 PhoH family protein. | 0.448 |
Tbis_1159 | Tbis_1158 | Tbis_1159 | Tbis_1158 | Hypothetical protein. | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | 0.524 |
Tbis_1159 | Tbis_1160 | Tbis_1159 | Tbis_1160 | Hypothetical protein. | Hypothetical protein. | 0.588 |
Tbis_1159 | Tbis_1161 | Tbis_1159 | Tbis_1161 | Hypothetical protein. | KEGG: ank:AnaeK_0654 cytidine deaminase. | 0.588 |
Tbis_1159 | era | Tbis_1159 | Tbis_1162 | Hypothetical protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.528 |
Tbis_1159 | ybeY | Tbis_1159 | Tbis_1157 | Hypothetical protein. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.524 |
Tbis_1160 | Tbis_1158 | Tbis_1160 | Tbis_1158 | Hypothetical protein. | PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. | 0.411 |
Tbis_1160 | Tbis_1159 | Tbis_1160 | Tbis_1159 | Hypothetical protein. | Hypothetical protein. | 0.588 |
Tbis_1160 | Tbis_1161 | Tbis_1160 | Tbis_1161 | Hypothetical protein. | KEGG: ank:AnaeK_0654 cytidine deaminase. | 0.773 |
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