STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1214TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ank:AnaeK_2254 thioredoxin; Belongs to the thioredoxin family. (121 aa)    
Predicted Functional Partners:
Tbis_3578
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ank:AnaeK_4061 thioredoxin reductase.
 
 
 0.922
Tbis_1213
PFAM: protein of unknown function DUF81; KEGG: mxa:MXAN_0177 membrane protein.
  
    0.726
Tbis_2932
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: ret:RHE_CH03935 tyrosine phosphatase protein.
  
 
 0.652
Tbis_1215
PFAM: beta-lactamase domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: sus:Acid_7272 beta-lactamase domain- containing protein.
     
 0.577
Tbis_1212
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: aba:Acid345_3083 rhodanese/sulfurtransferase- like protein.
     
 0.540
Tbis_1458
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: ade:Adeh_0817 glutamate synthase (NADH) large subunit.
   
 
 0.538
Tbis_1577
PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: mxa:MXAN_0278 mercuric reductase, truncated.
  
 
 0.531
Tbis_1993
KEGG: sus:Acid_7375 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.511
Tbis_2216
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: lpp:lpp2299 hypothetical protein.
  
 
 0.491
Tbis_0954
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: spe:Spro_3511 thioredoxin-dependent thiol peroxidase.
  
 
 0.462
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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