STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1380PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_1377 aliphatic sulfonates ABC transporter, permease protein. (277 aa)    
Predicted Functional Partners:
Tbis_1378
KEGG: bra:BRADO4360 putative alkanesulfonate ABC transporter, substrate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
 0.999
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.998
Tbis_1377
KEGG: mch:Mchl_3717 alkanesulfonate monooxygenase.
 
 0.994
ssuB-2
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.994
Tbis_1555
KEGG: mlo:mll9181 hypothetical protein.
 
 
 0.992
Tbis_1324
PFAM: Luciferase-like monooxygenase; KEGG: scl:sce4918 alkanesulfonate monooxygenase.
 
 0.979
Tbis_1322
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_2537 putative taurine ABC transporter, substrate binding protein.
  
 0.959
Tbis_1321
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpo:Mpop_1210 ABC transporter related.
  
 0.941
Tbis_1606
PFAM: NADPH-dependent FMN reductase; KEGG: cti:RALTA_A1785 NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein.
 
 
  0.938
Tbis_1556
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_4519 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.907
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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