STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1562PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein. (290 aa)    
Predicted Functional Partners:
Tbis_1563
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, putative multiple sugar transport system permease protein.
 
 0.993
Tbis_1561
ABC-type sugar transport system periplasmic component-like protein; KEGG: hypothetical protein.
 
  0.988
Tbis_3250
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2949 binding-protein-dependent transport systems inner membrane component.
 
 0.868
Tbis_1088
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component precursor; K02025 multiple sugar transport system permease protein.
   0.828
Tbis_2715
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3689 sugar transport system (permease).
   0.828
Tbis_2414
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02025 multiple sugar transport system permease protein.
   0.814
Tbis_1892
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1925 sugar transport system (permease).
 
 0.807
Tbis_0068
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component.
 
 0.803
Tbis_1885
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit.
   0.788
Tbis_0841
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1925 sugar transport system (permease).
 
 0.784
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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