STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1581PFAM: protein of unknown function DUF1470; KEGG: jan:Jann_2411 hypothetical protein. (187 aa)    
Predicted Functional Partners:
Tbis_1580
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pag:PLES_34021 hypothetical protein.
 
     0.855
Tbis_1257
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bcz:BCZK3521 ArsR family transcriptional regulator.
  
     0.640
Tbis_2146
PFAM: FAD dependent oxidoreductase; KEGG: acp:A2cp1_3444 amine oxidase.
  
     0.569
Tbis_3008
PFAM: protein of unknown function DUF6 transmembrane; KEGG: mxa:MXAN_0200 hypothetical protein.
 
     0.553
Tbis_1166
PFAM: regulatory protein TetR; KEGG: mes:Meso_0701 transcriptional regulator, TetR family.
  
     0.465
Tbis_3492
Hypothetical protein; KEGG: sdn:Sden_3024 GCN5-related N- acetyltransferase.
  
     0.408
Tbis_1250
PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3030 major facilitator transporter.
  
     0.402
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.