STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1633PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl- CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_B1413 acyl-CoA dehydrogenase- like. (402 aa)    
Predicted Functional Partners:
Tbis_1628
PFAM: flavin reductase domain protein FMN-binding; KEGG: ppf:Pput_3055 flavin reductase domain- containing protein.
 
 
 0.958
Tbis_1634
PFAM: regulatory protein TetR; KEGG: rce:RC1_3900 transcriptional regulator, TetR family protein.
 
     0.850
Tbis_2268
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.838
Tbis_0801
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_C0701 putative acyl-CoA dehydrogenase.
  
     0.595
Tbis_2845
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: met:M446_2006 electron transfer flavoprotein alpha subunit.
  
 
 0.583
Tbis_2846
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit.
  
 
 0.573
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
      0.555
Tbis_1632
Transcriptional regulator, TraR/DksA family; KEGG: rso:RSc1511 hypothetical protein.
       0.553
Tbis_3474
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: hypothetical protein.
  
 0.543
Tbis_2194
PFAM: Carboxymuconolactone decarboxylase; KEGG: pst:PSPTO_2865 4-carboxymuconolactone decarboxylase, putative.
  
     0.533
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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