STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1648TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; Hemerythrin HHE cation binding domain protein; KEGG: mno:Mnod_6169 heavy metal translocating P- type ATPase. (764 aa)    
Predicted Functional Partners:
Tbis_1690
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; globin; KEGG: afr:AFE_0860 iron-sulfur cluster-binding protein/oxidoreductase, FAD/NAD-binding; Belongs to the globin family.
  
  
 0.971
Tbis_1111
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; cytochrome P450; KEGG: reh:H16_B1279 two domain protein: cytochrome P450.
  
  
 0.802
Tbis_0014
TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: bpy:Bphyt_6893 heavy metal translocating P- type ATPase.
  
 
 0.759
Tbis_3354
PFAM: Heavy metal transport/detoxification protein; KEGG: rpi:Rpic_3544 heavy metal transport/detoxification protein.
  
 
 0.759
Tbis_0140
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: bam:Bamb_4089 oxidoreductase FAD/NAD(P)- binding subunit.
  
  
 0.703
Tbis_2351
Nitrite reductase (NO-forming); PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: bpd:BURPS668_A2061 multicopper oxidase domain- containing protein.
 
  
 0.669
Tbis_1647
PFAM: UspA domain protein; KEGG: hha:Hhal_2190 UspA domain protein.
  
    0.562
Tbis_1371
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.517
Tbis_0204
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bja:bll6060 putative catabolite gene activator.
  
  
 0.511
Tbis_1211
PFAM: protein of unknown function DUF156; KEGG: bca:BCE_0865 hypothetical protein.
 
  
 0.472
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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