STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1659KEGG: azc:AZC_1983 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (341 aa)    
Predicted Functional Partners:
Tbis_1658
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6084 ABC transporter, permease.
  
 0.993
Tbis_2946
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2716 binding-protein-dependent transport systems inner membrane component.
  
 0.984
Tbis_0308
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_2642 binding-protein-dependent transport systems inner membrane component.
  
 0.983
Tbis_1601
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dppC; ABC transporter membrane spanning protein (dipeptide); K02034 peptide/nickel transport system permease protein.
  
 0.983
Tbis_1851
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gme:Gmet_1236 binding-protein dependent transport system inner membrane protein.
  
 0.983
Tbis_3309
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3642 dipeptide ABC transporter (permease).
  
 0.983
Tbis_1657
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_06903 ABC-type dipeptide/oligopeptide/nickel transport system, permease components.
 
 0.967
Tbis_0306
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_1972 ABC transporter related.
   
0.948
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
    
0.900
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.899
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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