STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1759PFAM: regulatory protein TetR; KEGG: mch:Mchl_5494 transcriptional regulator, TetR family. (199 aa)    
Predicted Functional Partners:
Tbis_1760
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rlt:Rleg2_1533 methyltransferase type 12.
 
 
   0.908
Tbis_2899
Hypothetical protein.
  
     0.635
Tbis_0439
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rso:RS05447 transcription regulator protein.
  
     0.549
Tbis_2669
Transcriptional regulator, putative ATPase, winged helix family; PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: sus:Acid_5780 serine/threonine protein kinase.
  
   
 0.531
Tbis_0824
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: net:Neut_0085 transcriptional regulator, MerR family protein.
  
     0.526
Tbis_2632
ATPase; KEGG: rpc:RPC_1184 ATPase.
  
     0.523
Tbis_3518
Hypothetical protein.
  
     0.520
Tbis_2694
KEGG: pla:Plav_2389 hypothetical protein.
  
     0.491
Tbis_1021
PFAM: Carbohydrate-binding CenC domain protein; KEGG: bcj:BCAL1722 putative exported chitinase.
  
     0.484
Tbis_2482
PFAM: protein of unknown function DUF218; KEGG: ppr:PBPRB0680 hypothetical protein.
  
     0.483
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.