STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1765PFAM: ABC-2 type transporter; KEGG: bmj:BMULJ_01600 ABC-2 type transport system permease protein. (256 aa)    
Predicted Functional Partners:
Tbis_1766
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hha:Hhal_0240 ABC transporter related.
 
 
  0.991
Tbis_1764
PFAM: ABC-2 type transporter; KEGG: sfu:Sfum_0666 ABC-2 type transporter.
 
  
 
0.985
Tbis_0553
KEGG: met:M446_3966 hypothetical protein.
 
    0.574
Tbis_2158
KEGG: aba:Acid345_2220 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.565
Tbis_1767
PFAM: UspA domain protein; KEGG: scl:sce1079 universal stress protein.
       0.541
Tbis_0555
PFAM: protein of unknown function DUF181; KEGG: bcy:Bcer98_0958 hypothetical protein.
 
  
 0.520
Tbis_3104
KEGG: ade:Adeh_3915 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.492
Tbis_2157
PFAM: ABC-2 type transporter; KEGG: sat:SYN_01665 ABC-type multidrug transport system, permease component.
  
  
 
0.448
Tbis_3548
PFAM: ABC-2 type transporter; KEGG: sus:Acid_6966 ABC-2 type transporter.
  
  
  0.448
Tbis_3547
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6967 ABC transporter related.
 
    0.433
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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