Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tbis_1872 | Tbis_1873 | Hypothetical protein; KEGG: SLC16A13; solute carrier family 16, member 13 (monocarboxylic acid transporter 13); K08189 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 13. | PFAM: Pyridoxal-dependent decarboxylase; aminotransferase class V; Soluble liver antigen/liver pancreas antigen; KEGG: dal:Dalk_0154 pyridoxal-dependent decarboxylase. | 0.499 |
Tbis_1873 | Tbis_1872 | PFAM: Pyridoxal-dependent decarboxylase; aminotransferase class V; Soluble liver antigen/liver pancreas antigen; KEGG: dal:Dalk_0154 pyridoxal-dependent decarboxylase. | Hypothetical protein; KEGG: SLC16A13; solute carrier family 16, member 13 (monocarboxylic acid transporter 13); K08189 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 13. | 0.499 |